High-throughput and cost-effective sequencing software
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Gencove developed a unique, end-to-end, cloud-based platform to deliver genome-wide information through low-pass sequencing and imputation. Our platform is flexible and future-proofed. We partner with you to process the samples, help you choose the best sequencing options, conduct the analysis, and deliver the information you need in a format that easily integrates into your current workflows.
We offer three software-as-a-service levels: Professional, Business and Enterprise. Each tier offers progressively more options or customizations. Please see below for more information about the features and functionality of the platform.
Gencove’s platform is scalable and fast to set up for your organization’s high-throughput genotyping and analysis programs
Cloud-scale
Gencove is cloud-native, meaning end-to-end analysis is done in the cloud
Security
Rest assured Gencove is using industry-accepted best practices and frameworks
Compliance
Gencove is HIPAA compliant and aligns itself with ISO27001 and SOC2
Speed
Fast analytics together with lightning-fast uploads and downloads through CLI tools
Collaboration
Share projects with colleagues across your organization
Integration
Integrate directly with our API for production-ready workloads
Customization
Private configurations and reference panels for custom populations can be made available
Support
If you run into a snag, our team is there to help quickly and efficiently
More power and flexibility
Start with ready-to-run or custom pipelines
Choose an existing pipeline or work with Gencove’s scientists to optimize the platform for your application
Select the appropriate deployment model that fits your needs
End-to-end
From biological sample to data through our sequencing partners that have already integrated with Gencove
In-house
Set up the low-pass lab workflow in your lab and seamlessly use the Gencove imputation and analysis SaaS
SaaS-only
Integrate Gencove directly with your existing systems or greenfield deployments
Species-specific* packages
- Gencove platform access
- FastQ file uploads
- Multiple quality checks
Single user
Data access and management
- API or CLI
Low-pass sequencing
- Aligned BAM
- Imputed VCF to reference genomes
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Species-specific* packages
- Gencove platform access
- FastQ file uploads
- Multiple quality checks
Unlimited users
Data access and management
- API or CLI
- Special sharing and permissions
- Webhooks and custom notifications
- Merged VCF
Low-pass sequencing
- Aligned BAM
- Imputed VCF to reference genomes
Advanced analytics
- Custom developed haplotype reference panel for your sole use
Client support and services
- Library prep: training manuals and onboarding resources
- Dedicated success manager
Get a quote >
Species-specific* packages
- Gencove platform access
- FastQ file uploads
- Multiple quality checks
Unlimited users
Data access and management
- API or CLI
- Special sharing and permissions
- Webhooks and custom notifications
- Merged VCF
- HIPAA/Audit trails
- Single tenant infrastructure
- Extended data lifecycle management
- Compliance agreements
Low-pass sequencing
- Aligned BAM
- Imputed VCF to reference genomes
- Targeted capture or Exome upgrade
Advanced analytics
- Custom developed haplotype reference panel for your sole use
- Proprietary Polygenic Risk Scoring
- Associate genetic variation with phenotypes for Genome-Wide Association Studies (GWAS)
- Novel Variant Detection
- Germline variant calling (WGS, WES)
- Somatic variant calling (Tumor/Normal)
- Microbiome profiling
Client support and services
- Library prep: training manuals and onboarding resources
- Dedicated success manager
- Custom sequencing protocol development
