High-throughput and cost-effective sequencing data and analysis

Gencove developed a unique, end-to-end, cloud-based platform to deliver genome-wide information through low-pass sequencing and imputation. We partner with you to process the samples, choose the best sequencing options, conduct the analysis, and deliver the information in standard formats that easily integrate into your workflows.

We offer three software-as-a-service levels: Professional, Business and Enterprise. Each tier offers progressively more options or customizations. Please see below for more information about the features and functionality of the platform.

Gencove’s platform is scalable and fast to set up for your organization’s high-throughput genotyping and analysis programs

Cloud scale
Cloud-scale

Gencove is cloud-native, meaning end-to-end analysis is done in the cloud

Security
Security

Rest assured Gencove is using industry-accepted best practices and frameworks

Compliance
Compliance

Gencove is HIPAA compliant and aligns itself with ISO27001 and SOC2

Speed
Speed

Fast analytics together with lightning-fast uploads and downloads through CLI tools

Collaboration
Collaboration

Share projects with colleagues across your organization

Integration
Integration

Integrate directly with our API for production-ready workloads

Customization
Customization

Private configurations and reference panels for custom populations can be made available

Support
Support

If you run into a snag, our team is there to help quickly and efficiently

More power and flexibility

Start with ready-to-run or custom pipelines

Choose an existing pipeline or work with Gencove’s scientists to optimize the platform for your application

Select the appropriate deployment model that fits your needs

SaaS-only

Integrate Gencove directly with your existing systems or greenfield deployments

In-house

Set up the low-pass lab workflow in your lab and seamlessly use the Gencove imputation and analysis SaaS

End-to-end

From biological sample to data through our sequencing partners that have already integrated with Gencove

Professional

Species-specific* packages

  • Gencove platform access
  • FastQ file uploads
  • Multiple quality checks

Single user

Data access and management

  • API or CLI

Low-pass sequencing

  • Aligned BAM
  • Imputed VCF to reference genomes
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Business

Species-specific* packages

  • Gencove platform access
  • FastQ file uploads
  • Multiple quality checks

Unlimited users

Data access and management

  • API or CLI
  • Special sharing and permissions
  • Webhooks and custom notifications
  • Merged VCF

Low-pass sequencing

  • Aligned BAM
  • Imputed VCF to reference genomes

Advanced analytics

  • Custom developed haplotype reference panel for your sole use

Client support and services

  • Library prep: training manuals and onboarding resources
  • Dedicated success manager
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Enterprise

Species-specific* packages

  • Gencove platform access
  • FastQ file uploads
  • Multiple quality checks

Unlimited users

Data access and management

  • API or CLI
  • Special sharing and permissions
  • Webhooks and custom notifications
  • Merged VCF
  • HIPAA/Audit trails
  • Single tenant infrastructure
  • Extended data lifecycle management
  • Compliance agreements

Low-pass sequencing

  • Aligned BAM
  • Imputed VCF to reference genomes
  • Targeted capture or Exome upgrade

Advanced analytics

  • Custom developed haplotype reference panel for your sole use
  • Proprietary Polygenic Risk Scoring
  • Associate genetic variation with phenotypes for Genome-Wide Association Studies (GWAS)
  • Novel Variant Detection
  • Germline variant calling (WGS, WES)
  • Somatic variant calling (Tumor/Normal)
  • Microbiome profiling

Client support and services

  • Library prep: training manuals and onboarding resources
  • Dedicated success manager
  • Custom sequencing protocol development
Get a quote >