The integrated solution for genomic data generation, analysis, and management

Explorer analysis cloud is a data analytics platform, built to enable scientists to organize, analyze, and visualize their genomic datasets all in one place.

Embrace the efficiency of Shortcuts for common bioinformatics workflows

Use Shortcuts, a library of built in methods for common genomic analyses, to fast track:

• Merging, filtering, and annotating VCFs

• Calculating genotype discordance

• Performing genome-wide association studies

• Developing and calculating polygenic risk scores

Access the expertise of Gencove’s data science team

• Consultative on-ramp project with dedicated data science support

Robust cloud infrastructure without the hassle

• Scalable compute cluster with private storage

• Flexible, genomics oriented, with an easy-to-use interface and native integration to Gencove datasets

Focus on results, not managing pipelines and workflows

• Read alignment
• Imputation
• Variant calling
• Breed analysis
• Quality control
• Sample metadata store

Access your data in the way that works for you and your team

• Web, CLI and API access
• Third party integrations like S3 buckets and BaseSpace

Dig into the documentation here

Flexibility and ease of use with a sequencer agnostic approach

• Transfer raw sequencing data from any sequencing instrument to the cloud

Reduce the headaches that come with transferring data to the cloud

• Demultiplex base calls into FASTQ files
• Perform sequencing run-level quality control
• Automatic downstream analysis kick off

Sequencing services designed for scale

• Low-pass sequencing for the power of whole genome sequencing at the price of an array
• High-coverage sequencing for comprehensive variant discovery
• Innovative approaches like low-pass WGS plus capture across a range of species

Flexible and adaptable lab requirements

• Partner labs around the world that accept different sample types and maintain regulatory classifications
• Capability to handle both clinical and research samples

Seamless and durable data delivery

• Data delivered through the Gencove platform
• Range of deliverables from raw FASTQs to comprehensive quality control statistics to variant calls
• Easy-to-use web dashboard, command line interface, and/or API

Custom probe design for target capture at critical sites

• Access a lab team with extensive experience designing and selecting for a higher-fidelity analysis at key loci

Cost-effective and high-throughput library preparation methods

• The Gencove team has developed a range of library preparation methods to keep costs down